Overview

    fs-tool takes as an input a file of peptide predictions for the HLA class I alleles and proteome of interest, performs the fraction shared calculations and generates an output file which lists the fraction shared by the different metrics. If a cohort of subjects/genotypes is provided, comparisons can be made between an allele of interest and the individuals.

    This documentation provides details on:

    • generating the input files
    • running the tool
    • interpreting the output file
    • integrating the output file into your cohort calculations.